3- day Workshop on MRI and fMRI data analysis in Freesurfer

3-Day Workshop on MRI and fMRI data analysis in Freesurfer

Instructors:

Dr. Reza Rajimehr

Dr. Elahe Yargholi

Tutor:

Hossein Rafipoor

Title of the workshop:

Workshop on MRI and fMRI data analysis in Freesurfer

Syllabus of the workshop:

First day

• Introduction to the workshop – Dr. Reza Rajimehr
• A brief tutorial on Linux – Dr. Reza Rajimehr
• Structural MRI analysis and cortical surface reconstruction in Freesurfer – Dr. Reza Rajimehr
• Visualization of anatomical volumes and surfaces in Freesurfer – Dr. Reza Rajimehr and Dr. Elahe’ Yargholi

Second day

• Basics of fMRI analysis – Dr. Reza Rajimehr
• Preprocessing of fMRI data in FsFast – Dr. Reza Rajimehr and Dr. Elahe’ Yargholi
• Functional-anatomical registration – Dr. Reza Rajimehr
• Single-subject analysis of fMRI data in FsFast – Dr. Reza Rajimehr and Dr. Elahe’ Yargholi
• Visualization of functional maps – Dr. Reza Rajimehr and Dr. Elahe’ Yargholi

Third day

• Group-level analysis of fMRI data in FsFast – Dr. Elahe’ Yargholi
• Region-of-interest analysis – Dr. Reza Rajimehr
• Transfer of structural and functional data between Freesurfer and Matlab – Dr. Reza Rajimehr
• Functional connectivity analysis - Hossein Rafipoor
• Conclusion of the workshop – Dr. Reza Rajimehr

Date: 3-5 Sept. 2018

Place: Shiraz