3-Day Workshop on MRI and fMRI data analysis in Freesurfer

3-Day Workshop on MRI and fMRI data analysis in Freesurfer (Hybrid Workshop)
Instructors:
Dr. Reza Rajimehr
Dr. Neda Afzalian
Date: 14-15-16 June, 2023

Syllabus of the workshop:
First day
• Introduction to the workshop
• A brief tutorial on Linux 
• Structural MRI analysis and cortical surface reconstruction in Freesurfer 
• Visualization of anatomical volumes and surfaces in Freesurfer 
• Making flat patches and creating labels 
Second day
• Basics of fMRI analysis 
• Preprocessing of fMRI data in FsFast 
• Functional-anatomical registration 
• Single-subject analysis of fMRI data in FsFast 
• Visualization of functional maps 
Third day
• Group-level analysis of fMRI data in FsFast 
• Region-of-interest analysis 
• Transfer of structural and functional data between Freesurfer and Matlab 
• Functional connectivity analysis 
• Conclusion of the workshop 

Place: NBML, Tehran